Users

Below you will find ontologies and institutions & groups using BFO, sorted alphabetically.

Ontologies


Ontology Link
(EXperimental ACTions) Biomedical Protocol Ontology (EXACT2) http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4255744
(Microbial) Typing Ontology (TypOn) http://www.phyloviz.net/typon
ACGT Master Ontology (ACGT MO) http://bioportal.bioontology.org/ontologies/ACGT-MO
AFO Foundational Ontology http://esw.w3.org/topic/HCLS/AFO_Foundational_Ontology
ARIES (Arkansas Imaging Enterprise System) Knowledge Graph https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8866818/
Actionable Intelligence Retrieval System (AIRS) http://ncor.buffalo.edu/ontologies/AIRS_Ontologies.pdf
Addiction Ontology (AO) https://www.taylorfrancis.com/chapters/edit/10.4324/9781003032762-46/addiction-ontology-unify-competing-conceptualizations-addiction-robert-kelly-janna-hastings-robert-west
Additive Manufacturing Ontology (AMO) https://www.sciencedirect.com/science/article/pii/S0166361518301647
Adolescent Depression Ontology (ADO) https://www.jmir.org/article/viewFile/jmir_v19i7e259/2
Adverse Event Reporting Ontology (AERO) http://purl.obolibrary.org/obo/aero
African Wildlife Ontology (AWO) https://arxiv.org/pdf/1905.09519.pdf
Agronomic Linked Data (AgroLD) https://www.biorxiv.org/content/10.1101/325423v3.full.pdf
Agronomy Ontology (AGRO) https://bigdata.cgiar.org/resources/agronomy-ontology/
Air Force Research Laboratory, Rome, New York http://www.wpafb.af.mil/afrl
Algorithm-Implementation-Execution Ontology Design Pattern http://ontologydesignpatterns.org/wiki/images/4/41/WOP2016_paper_07.pdf
Allotrope Foundation: Rethinking Scientific Data https://www.allotrope.org/
Alzheimer Disease Ontology (ADO) http://www.sciencedirect.com/science/article/pii/S155252601300085X
Alzheimer's Disease Diagnosis Ontology (ADDO) https://ma.x-mol.com/paper/1366901247607140352
Anatomy of the Insect Skeleto-Muscular system ontology (AISM) https://www.preprints.org/manuscript/202201.0254/v1
Animals in Context Ontology (ACO) http://ceur-ws.org/Vol-897/session1-paper04.pdf
Antimicrobial-Microorganism Ontology https://www.sciencedirect.com/science/article/pii/S1532046411001675
Apollo Structured Vocabulary (Apollo-SV) http://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-016-0092-y
Asset Management Ontology (AMODO) https://www.sciencedirect.com/science/article/abs/pii/S2452414X21000947
AstraZeneca http://www.astrazeneca.com/
Autism-DSM-ADI-R Ontology (ADAR) http://www.ncbi.nlm.nih.gov/pubmed/26151311
Autodesk https://www.autodesk.com/
BIRNLex https://bioportal.bioontology.org/ontologies/BIRNLEX
Bacterial Clinical Infectious Diseases Ontology (BCIDO) http://www.sciencedirect.com/science/article/pii/S1532046415001549
Bank Ontology http://world-comp.org/p2011/IKE5165.pdf
Battle Management Ontology (BMO) http://link.springer.com/article/10.1007/s10489-016-0834-7
Behavior Change Intervention Ontology (BCIO) https://wellcomeopenresearch.org/articles/5-123
Behavior Perspective Model (BPM) https://books.google.com/books?hl=en&lr=lang_en&id=u8xmCgAAQBAJ&oi=fnd&pg=PA366&ots=p35Xg1rqn0&sig=6VibTWt8Y6mpTSyPFFc68xHePDw#v=onepage&q&f=false
Bentley Software, Inc. No Link Available
Berkeley Bioinformatics Open-Source Projects (BBOP) http://berkeleybop.org/
Beta Cell Genomics Application Ontology (BCGO) http://obofoundry.org/ontology/bcgo.html
Bio-Knowledge Network Ontology (BioKNO) https://www.degruyter.com/view/journals/jib/15/3/article-20180023.xml
BioAssay Ontology http://www.bioassayontology.org/
BioTop http://ebooks.iospress.nl/publication/46379
BioTopLite2 http://purl.org/biotop/btl2.owl
Bioinformatics Web Service Ontology (OBIWS) http://code.google.com/p/obi-webservice
Biological Collections Ontology (BCO) http://obofoundry.org/ontology/bco.html
Biomedical Ethics Ontology http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2725426/
Biomedical Grid Terminology (BiomedGT, retired) https://wiki.nci.nih.gov/pages/viewpage.action?pageId=63996208
Biomedical Knowledge Engineering Lab at Seoul National University (SNU BiKE) http://bike.snu.ac.kr/
Biomedical Study - Lifecycle Management (BMS-LM) core ontology https://doi.org/10.1016/j.jbi.2022.104007
Biomimetic Ontology http://link.springer.com/chapter/10.1007/978-3-319-31782-3_13
Blood Ontology (BLO) http://mba.eci.ufmg.br/BLO
Body Fluids Ontology (BFLO) http://ontology.buffalo.edu/smith/articles/BFLO_ICBO_2011.pdf
Bone Dysplasia Ontology (BDO) http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3338382/
Brain Operation Database (BODB) http://neuroinformatics.usc.edu/resources/brain-operation-database-bodb
CHRONIOUS Ontology Suite http://ceur-ws.org/Vol-833/paper22.pdf
CICCONETO et al., 2020; CICCONETO, 2021) spatial relations ontology No Link Available
CIDO-COVID-19 https://ieeexplore.ieee.org/abstract/document/9629555
CPR Ontology for the Institute of Medicine's (IOM) Computer-Based Patient Record Ontology http://code.google.com/p/cpr-ontology
CTSAconnect http://www.ctsaconnect.org/
CUBRC http://www.cubrc.org/index.php/data-science-and-information-fusion/ontology/'94
Cancer Cell Ontology (OncoCL) http://ceur-ws.org/Vol-1060/icbo2013_submission_75.pdf
Cancer Chemoprevention Ontology (CanCo) http://bioportal.bioontology.org/ontologies/CANCO
Cardiovascular Disease Ontology (CVDO) https://www.ebi.ac.uk/ols/ontologies/cvdo
Case Based Reasoning (CBR) Ontology https://doi.org/10.1109/ISSE51541.2021.9582535
Categorical Temporal Phenomenology http://www.roentgensemiotics.net/phenomenology.htm
Cell Behavior Ontology (CBO) http://cbo.biocomplexity.indiana.edu/
Cell Culture Ontology (CCONT) https://bioportal.bioontology.org/ontologies/CCONT
Cell Cycle Ontology http://genomebiology.com/2009/10/5/R58
Cell Expression, Localization, Development and Anatomy Ontology (CELDA) http://nar.oxfordjournals.org.gate.lib.buffalo.edu/content/early/2013/12/03/nar.gkt1264.full.pdf
Cell Line Ontology (CLO) http://obofoundry.org/ontology/clo.html
Cell Ontology http://obofoundry.org/ontology/cl.html
Cellular Microscopy Phenotype Ontology (CMPO) http://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-016-0074-0
Center for e-Design http://www.edesign.ecs.umass.edu/
Chemical Analysis Ontology (CAO) http://champ-project.org/
Chemical Entities of Biological Interest (ChEBI) http://www.ebi.ac.uk/chebi
Chemical Information Ontology (CHEMINF) http://obofoundry.org/ontology/cheminf.html
Chemical Methods Ontology (CHMO) http://obofoundry.org/ontology/chmo.html
Cigarette Smoke Exposure Ontology (CSEO) http://www.jbiomedsem.com/content/pdf/2041-1480-5-31.pdf
Clinical Data Integration Model (CDMO) https://www.ncbi.nlm.nih.gov/pubmed/24954896
Clinical Narrative Temporal Relation Ontology (CNTRO) https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3248753/?
Clinical Trial Protocol Ontology (CTP-O) https://www.sciencedirect.com/science/article/pii/S1569190X18301114
Clusters of Orthologous Groups (COG) Analysis Ontology (CAO) https://bioportal.bioontology.org/ontologies/CAO
Cognition-Guided Surgery (CGS) Ontology http://archiv.ub.uni-heidelberg.de/volltextserver/22579
Cognitive Paradigm Ontology (COGPO) http://cogpo.org/
Cognitive Process Ontology (CPO) No Link Available
Collaborative Learning Healthcare Systems (CLHS) ontology https://onlinelibrary.wiley.com/doi/full/10.1002/lrh2.10306
Common Anatomy Reference Ontology (CARO) http://obofoundry.org/ontology/caro.html
Common Core Cyber Ontology (C3O) https://www-spiedigitallibrary-org.gate.lib.buffalo.edu/conference-proceedings-of-spie/10635/106350F/A-common-core-based-cyber-ontology-in-support-of-cross/10.1117/12.2307719.full?SSO=1
Common Core Ontologies (CCO) http://www.cubrc.org/index.php/data-science-and-information-fusion/ontology
Communication Standards Ontology (CSO) http://www.ncbi.nlm.nih.gov/pubmed/20543345
Comparative Data Analysis Ontology (CDAO) https://bioportal.bioontology.org/ontologies/CDAO
Computational Neuroscience Ontology (CNO) https://bioportal.bioontology.org/ontologies/CNO
Computer Aided Engineering Modeling Language (CAEML) Ontology https://www.clics-network.org/downloads/NAFEMS_2016_Towards%20Cognitive%20Computer%20Aided%20Engineering.pdf
Computer-Based Patient Record Ontology (CPRO) https://code.google.com/archive/p/cpr-ontology/
Conceptual Model Ontology (CMO) http://ceur-ws.org/Vol-833/paper25.pdf
Core Data Integration Model (CDIM) https://www.researchgate.net/publication/263323866_Clinical_Data_Integration_Model_Core_Interoperability_Ontology_for_Research_Using_Primary_Care_Data
Coriell Cell Line Ontology http://efo.sourceforge.net/coriell.htm
Coronavirus Infectious Disease Ontology (CIDO) http://www.ontobee.org/ontology/cido
Crop Planning and Production Process Ontology (C3PO) http://ceur-ws.org/Vol-2969/paper12-IFOW.pdf
CybOnto (Cognitive Digital Twin Ontology for CyberSecurity) https://arxiv.org/pdf/2108.00551.pdf
Cybonto Cyber Security Ontology https://arxiv.org/abs/2108.00551
DOQS http://www.doqs.com/
DSpace at NTNUA http://dspace.lib.ntua.gr/handle/123456789/3046
Dairy Cattle Performance Ontology (DCPO) http://ceur-ws.org/Vol-3073/paper3.pdf
Darwin Core (DwC) http://rs.tdwg.org/dwc
Data Integration Aggregated Model for Nuclear Deployment (DIAMOND) https://link.springer.com/chapter/10.1007/978-3-030-82083-1_2
Data Model for Representing Biographical Information for Prosopography (Bio-CRM) https://seco.cs.aalto.fi/publications/2018/tuominen-et-al-rrl-2018.pdf
Data Use Ontology (DUO) http://www.obofoundry.org/ontology/duo.html
Decision Ontology https://doi.org/10.3390/systems6040046
Diabetes Mellitus Treatment Ontology (DMTO) https://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-018-0176-y
Diabetes mellitus Diagnosis Ontology (DDO) http://link.springer.com/article/10.1186/s40535-016-0021-2
Digital Objects in Philosophy Ontology (DOPHO) https://publiscologne.th-koeln.de/frontdoor/deliver/index/docId/1363/file/MAT_Seidlmayer.pdf
Document Act Ontology (D-Acts) https://code.google.com/p/d-acts
Drug Interaction Ontology (DIO) http://www.ncbi.nlm.nih.gov/pubmed/15360854
Drug Ontology (DrOn) http://obofoundry.org/ontology/dron.html
Drug Repurposing Ontology (DRO) https://www.researchgate.net/profile/Werner_Ceusters/publication/335079148_Foundations_for_a_Realism-based_Drug_Repurposing_Ontology/links/5d4d7ce44585153e5948eb68/Foundations-for-a-Realism-based-Drug-Repurposing-Ontology.pdf
Drug-drug Interaction Evidence Ontology (DIDEO) http://obofoundry.org/ontology/dideo.html
Drug-drug Interaction Ontology (DINTO) http://www.obofoundry.org/ontology/dinto.html
Dumontier Lab http://dumontierlab.com/index.php?page=ontologies
ENVOn (3D shape ontology) http://www.semantic-web-journal.net/system/files/swj3043.pdf
ENanoMapper (ENM) https://github.com/enanomapper
Eagle-I Research Resource Ontology (ERO) https://open.med.harvard.edu/wiki/display/eaglei/Ontology
Ecole polytechnique federale de Lausanne (EPFL) https://people.epfl.ch/cgi-bin/people?id=105551&lang=en&cvlang=en
EifcOWL (Enhanced Ontology for the Construction Industry Foundation Classes) https://content.iospress.com/articles/applied-ontology/ao210254
Electrocardiography Ontology (ECG) http://www.j-biomed-inform.com/article/S1532-0464(10)00118-8/abstract
Eligibility Criteria Ontology (EC-O) https://www.sciencedirect.com/science/article/pii/S1569190X18301114
Elsevier Smart Content Strategy http://www.elsevier.com/wps/find/authored_newsitem.cws_home/companynews05_01849
Email Ontology http://ncor.buffalo.edu/2013/STIDS/5-Email.pptx
Emotion Ontology (EMO) http://www.obofoundry.org/ontology/mfoem.html
End of Life (EoL) Domain Ontology https://www.sciencedirect.com/science/article/abs/pii/S0167739X19326640
Engineering-to-BioMimetic Ontology (E2BMO) https://www.mdpi.com/2411-9660/2/4/53
Environment Ontology http://obofoundry.org/ontology/envo.html
Epidemiology Ontology (EPO) http://obofoundry.org/ontology/epo.html
Epilepsy Ontology (EPIO) https://www.researchsquare.com/article/rs-1259791/v1
Epilepsy and Seizure Ontology (EPSO) http://www.ncbi.nlm.nih.gov/pubmed/23686934
EuPath Ontology https://bioportal.bioontology.org/ontologies/EUPATH/?p=summary
European Materials Modeling Ontology (EMMO) https://emmc.info/wp-content/uploads/2017/12/EMMC_IntOp2017-Cambridge_Ghedini_Bologna.pdf
Event-Based Functional Behavior Ontology (EFBO) http://ceur-ws.org/Vol-1660/caos-paper2.pdf
Event-Based Ontology for Historical Description (EOHD) https://www.emeraldinsight.com/doi/abs/10.1108/DLP-02-2018-0005
Evolution Ontology (EO) http://code.google.com/p/evolution-ontology
Experimental Factor Ontology (EFO) http://www.ebi.ac.uk/efo
Exposé https://lirias.kuleuven.be/bitstream/123456789/273222/1/sokd10.pdf
Extensible Neuroimaging Archive Toolkit (XNAT) http://www.aifb.kit.edu/images/e/e5/Sfb-infrastructure-spie2016.pdf
FASTO Ontology (incorporates BFO, FHIR, CPG,and SSN) https://bioportal.bioontology.org/ontologies/FASTO
Feedback Intervention Ontology (FIO) https://github.com/Display-Lab
Financial Documents Ontology (FIN) http://ceur-ws.org/Vol-2969/paper57-SoLEE.pdf
Fission Yeast Phenotype Ontology (FYPO) http://www.pombase.org/documentation/gene-page-phenotypes
Flower-Visiting Domain Ontology (FV), Known Flower-Visiting Group Domain Ontology (KFG), Flower-Visiting Behavior Application Ontology (FVB) and Observation-Date Application Ontology (OBD) http://www.sciencedirect.com/science/article/pii/S157495411400082X
Flybase Drosophila Anatomy Ontology (DAO) http://obofoundry.org/ontology/fbbt.html
Flybase Drosophila Phenotype Ontology (FYPO) http://obofoundry.org/ontology/fypo.html
Food Ontology (FoodOn) http://obofoundry.org/ontology/foodon.html
Food Recipe Ingredient Substitution Ontology (FRISO) https://doi.org/10.3390/s22031095
Food-Energy-Water Systems Ontology (FEWsONT) https://www.liebertpub.com/doi/full/10.1089/ees.2018.0551
Foundational Model of Anatomy (FMA) http://obofoundry.org/ontology/fma.html
Framework for Semantic Workflow Composition in the Geology Domain http://ceur-ws.org/Vol-2228/abstract6.pdf
Gastrointestinal Endoscopy Ontology (GIEO) http://ceur-ws.org/Vol-833/paper36.pdf
Gender, Sex, and Sexual Orientation (GSSO) ontology https://academic-oup-com.gate.lib.buffalo.edu/jamia/advance-article-abstract/doi/10.1093/jamia/ocaa061/5858296
Gene Ontology (GO) http://obofoundry.org/ontology/go.html
Gene Regulation Ontology (GRO) https://ub-madoc.bib.uni-mannheim.de/35191/1/dissertation_beisswanger.pdf
General Information Model (GIM) http://jamia.bmj.com/content/20/5/986.full
Genomic Epidemiology Ontology (GenEpiO) http://obofoundry.org/ontology/genepio.html
Genomic Feature and Variation Ontology (GFVO) https://peerj.com/articles/933/
GeoCore Geology Ontology https://www.lume.ufrgs.br/bitstream/handle/10183/225741/001129935.pdf
GeoReservoir Ontology https://doi.org/10.1016/j.cageo.2021.105005
GeoReservoir ontology for deep-marine depositional system geometry https://www.sciencedirect.com/science/article/pii/S0098300421002880
Geographical Entity Ontology (GEO) http://www.obofoundry.org/ontology/geo.html
Gestalt https://ieeexplore.ieee.org/abstract/document/6956738
Global Electronic Health Record Ontology (G-EHR-O) https://www.sciencedirect.com/science/article/pii/S1569190X18301114
Good Ontology Design (GoodOD) http://portal.uni-freiburg.de/imbi/sections/mi-en/projects/goodod?set_language=en
Graphs, Objects, Points, Properties, Roles, and Relationships Ontology (GOPPRRE) https://ieeexplore.ieee.org/stamp/stamp.jsp?arnumber=9534721
HERMES 4D Printing Ontology https://www.sciencedirect.com/science/article/pii/S0264127521007486
HIGHFLEET http://www.highfleet.com/
Health Data Ontology Trunk (HDOT) http://purl.org/hdot
Hemocomponents and Hemoderivatives Ontology (HEMONTO) http://mba.eci.ufmg.br/downloads/ontobras-2013_paper1.pdf
Host Pathogen Interactions Ontology (HPO) http://bioportal.bioontology.org/ontologies/HPIO?p=classes
Human Activity and Infrastructure Foundry (HAIF) https://arxiv.org/ftp/arxiv/papers/1809/1809.09548.pdf
Human Disease Ontology (DOID) http://www.obofoundry.org/ontology/doid.html
Human Experience Realist Ontology (HERO) https://www.researchgate.net/publication/316557588_A_Human_Experience_Realist_Ontology_in_Basic_Formal_Ontology
Human Interaction Network Ontology (HINO) http://arxiv.org/pdf/1311.3355.pdf
Human Physiology Simulation Ontology (HuPSON) http://www.jbiomedsem.com/content/pdf/2041-1480-4-35.pdf
INRIA Lorraine Research Unit http://www.inria.fr/inria/organigramme/fiche_ur-lor.en.html
Infectious Disease Ontology http://obofoundry.org/ontology/ido.html
Influenza Research Database (IRD) http://www.fludb.org/brc/home.spg?decorator=influenza
Information Artifact Ontology (IAO) http://obofoundry.org/ontology/iao.html
Information Security Domain (ISD) ontology https://ieeexplore.ieee.org/abstract/document/8795392
Informed Consent Ontology (ICO) http://ceur-ws.org/Vol-2285/ICBO_2018_paper_59.pdf
Innovative Capabilities of Additive Manufacturing (ICAM) Ontology http://computingengineering.asmedigitalcollection.asme.org/article.aspx?articleid=2674329
Institute for Defense Analysis http://www.ida.org/
Integrated Framework for Additively Manufactured Products (IFAMP) ontology https://buffalo.app.box.com/v/integrating-ontologies
Interaction Network Ontology (INO) http://www.cmpe.boun.edu.tr/~ozgur/papers/VDOS2014.pdf
Interdisciplinary Prostate Ontology Project (IPOP) http://ipop.ontodev.com/
International Center for Food Ontology, Operability, Data and Semantics (IC-FOODS) http://www.ic-foods.org/
International Classification of Diseases Ontology (ICDO) No Link Available
Interoperative Neuromonitoring Ontology (IOM) https://pubmed.ncbi.nlm.nih.gov/35062118/
Intervention Setting Ontology https://wellcomeopenresearch.org/articles/5-124
Intracranial Aneurysm (ICA) Ontology http://www.sciencedirect.com/science/article/pii/S1532046415000519
Iranian Traditional Medicine General Ontology (IrGO) https://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-021-00237-1
Japan Advanced Institute of Science and Technology (JAIST) http://www.jaist.ac.jp/ks/english/
Johns Hopkins University Applied Physics Lab http://www.jhuapl.edu/
Knowledge Base Of Biomedicine (KaBOB) http://www.biomedcentral.com/content/pdf/s12859-015-0559-3.pdf
Knowledge Object Reference Ontology (KORO) https://onlinelibrary.wiley.com/doi/full/10.1002/lrh2.10054
Kobe University, Graduate School of Medicine, Department of Sociomedical Informatics http://www.med.kobe-u.ac.jp/
L3 Data Tactics Corporation https://www.data-tactics.com/
Language and Computing http://www.landcglobal.com/
Library of Integrated Network-based Cellular Signatures https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-017-1981-5
Lipid Ontology http://obofoundry.org/ontology/lipro.html
Literary Theme Ontology (LTO) https://github.com/theme-ontology/lto
MIRO and IRbase http://www.plosntds.org/article/info:doi/10.1371/journal.pntd.0000465
MOCA (Multi-attribute Ontology-based Criticality Analysis) https://link.springer.com/article/10.1007/s43684-022-00021-7
Machine Learning Schema (ML-Schema) ontology https://openreview.net/pdf?id=B1e8MrXVxQ
Maintenance Activity Reference Ontology http://www.semantic-web-journal.net/system/files/swj3067.pdf
Major histocompatibility complex (MHC) Restriction Ontology (MRO) http://obofoundry.org/ontology/mro.html
Malaria Ontology (IDOMAL) http://obofoundry.org/ontology/idomal.html
Manufacturing Service Description Language (MSDL) ontology https://link.springer.com/chapter/10.1007/978-3-319-99707-0_40
Manufacturing Supply Chain Ontology (MSCO) https://buffalo.box.com/s/rbapg73v4jq18dvw0rf2jnszndvnxmb0
Medical University Graz - Institute of Medical Informatics, Statistics and Documentation http://user.medunigraz.at/stefan.schulz
Medication Adherence Behavior Ontology (MAB-Ontology) https://scholarworks.iupui.edu/bitstream/handle/1805/17767/Sawesi_iupui_0104D_10326.pdf
Mental Disease Ontology (MFO-MD) http://obofoundry.org/ontology/mfomd.html
Mental Functioning Ontology (MF) http://obofoundry.org/ontology/mf.html
Microbiology Ontology (MicrO) http://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-016-0060-6
Middle Layer Ontology for Clinical Care (MLOCC) http://p-medicine.eu/project/wp-4
Military Ontology http://basic-formal-ontology.org/publications#salmen
Military Scenario Ontology (MSO) http://link.springer.com/article/10.1007/s10489-016-0834-7
Minimum Information Model for Patient Safety (MIMPS) http://www.ncbi.nlm.nih.gov/pubmed/27139388
Mission and Means Framework (MMF) Ontology https://ieeexplore.ieee.org/abstract/document/8455742/
Modal Relation Ontology (MRO) https://www.spiedigitallibrary.org/conference-proceedings-of-spie/10635/106350H/Problems-with-prescriptions--disentangling-data-about-actual-versus-prescribed/10.1117/12.2307718.short?SSO=1
Mode of Delivery (MoD) Ontology https://wellcomeopenresearch.org/articles/5-125
Model for Clinical Information (MCI) http://bmcmedinformdecismak.biomedcentral.com/articles/10.1186/s12911-016-0248-9
Model for Describing Insect Anatomical Structures (MoDIAS) https://www.preprints.org/manuscript/202201.0254/v1
Modular Environmental Modeling Ontology (MEMOn) https://ieeexplore-ieee-org.gate.lib.buffalo.edu/abstract/document/8599597
Mouse Pathology Ontology (MPATH) http://obofoundry.org/ontology/mpath.html
NMR-Instrument Component of Metabolomics Investigations Ontology http://bioportal.bioontology.org/ontologies/NMR?p=classes&conceptid=root
Name Reaction Ontology (RXNO) http://obofoundry.org/ontology/rxno.html
Nanoparticle Ontology (NPO) http://www.ncbi.nlm.nih.gov/pubmed/20211274
Nanoparticles Impact on Human Cell morphology Ontology (NIHCO) https://www.bjbabe.ro/wp-content/uploads/2017/10/18_RODINO.pdf
National Center for Multi-Source Information Fusion http://www.infofusion.buffalo.edu/
Neomark Oral Cancer Ontology (NEOMARK4) https://bioportal.bioontology.org/ontologies/NEOMARK4
Neural Electromagnetic Ontologies (NEMO) http://nemo.nic.uoregon.edu/
NeuroPsychological Testing Ontology (NPT) http://www.unbsj.ca/sase/csas/data/ws/icbo2013/papers/research/icbo2013_submission_31.pdf
Neuroscience Information Framework http://www.neuinfo.org/
Neuroscience Information Framework Cell Ontology (NIFCELL) https://bioportal.bioontology.org/ontologies/NIFCELL
Neuroscience Information Framework Dysfunction Ontology (NIFDYS) https://bioportal.bioontology.org/ontologies/NIFDYS
Neuroscience Information Framework Standard Ontology (NIFSTD) http://bioportal.bioontology.org/ontologies/NIFSTD
Next Generation Sequencing Ontology (NGSONTO) https://github.com/lindenb/ngs-ontology
Next-Generation Biobanking Ontology (NGBO) http://ceur-ws.org/Vol-2180/paper-02.pdf
Non-Coding RNA Ontology (NCRO) http://soc.southalabama.edu/~huang/papers/BIBM-15-1.pdf
OBDMR: An Ontology-Based Data Model for Railways https://doi.org/10.1166/jctn.2020.8662
OBR Scolio (scoliosis) ontology https://www.sciencedirect.com/science/article/pii/S0169260719300665
OSTHUS https://www.youtube.com/watch?v=WKuK2G-NUk8
Ocular Disease Ontology (ODO) http://www.unbsj.ca/sase/csas/data/ws/icbo2013/papers/posters/icbo2013_submission_67.pdf
Ocular Immune-Mediated Inflammatory Diseases Ontology (OcIMIDo) https://www.sciencedirect.com/science/article/pii/S001048252100336X
OncoCL-KB http://ceur-ws.org/Vol-1546/poster_65.pdf
OntoAlign++ http://ceur-ws.org/Vol-1041/ontobras-2013_paper52.pdf
OntoCAT http://www.ontocat.org/
OntoCOG http://ontobat.hegroup.org/
OntoDM Core http://www.ontodm.com/doku.php?id=ontodm-core
OntoForInfoScience http://www2.marilia.unesp.br/revistas/index.php/bjis/article/viewFile/5426/3970
OntoMaton http://isa-tools.org/
Ontologies for Representing Surgical Procedure Models (OntoSPM) https://ontospm.univ-rennes1.fr/doku.php?id=ontology
Ontologized Minimum Information About BIobank data Sharing (OMIABIS) http://obofoundry.org/ontology/omiabis.html
Ontology Based Clinical Decision Support System for Geriatrics https://www.ingentaconnect.com/contentone/asp/jctn/2020/00000017/00000001/art00042
Ontology Based Decision Support System for Tuberculosis Management and Control https://www.researchgate.net/publication/312296048
Ontology Research Group http://org.buffalo.edu/
Ontology for Adverse Events (OAE) http://obofoundry.org/ontology/oae.html
Ontology for Autism Spectrum Disorder http://www.sciencedirect.com/science/article/pii/S1532046415001367
Ontology for Biobanking (OBIB) http://obofoundry.org/ontology/obib.html
Ontology for Biomedical Investigations (OBI) http://obofoundry.org/ontology/obi.html
Ontology for Cancer research variables (OCRV) https://bmcmedinformdecismak.biomedcentral.com/articles/10.1186/s12911-018-0636-4
Ontology for Computable Eligibility Criteria - Hepatitis C Virus (OCEC-HCV) https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6371316/
Ontology for Dengue Fever (IDODEN) http://journals.plos.org/plosntds/article?id=10.1371/journal.pntd.0003479
Ontology for Documentation of Variable/Data Source Selection (ODVDS) http://ceur-ws.org/Vol-2427/SEPDA_2019_paper_15.pdf
Ontology for Drug Discovery Investigations (DDI) http://purl.org/ddi/home
Ontology for Energy Investigations (OEI) https://www.researchgate.net/publication/234128482_Facilitating_Knowledge_Sharing_and_Analysis_in_Energy_Informatics_with_the_Ontology_for_Energy_Investigations_%28OEI%29
Ontology for Functionally Graded Materials (OFGM) https://www.academia.edu/27922525/Development_of_a_Manufacturing_Ontology_for_Functionally_Graded_Materials
Ontology for General Medical Science (OGMS) http://obofoundry.org/ontology/ogms.html
Ontology for Genes and Genomes - Mouse (OGG-MM) http://www.ontobee.org/ontology/OGG-Mm
Ontology for Genetic Interval (OGI) http://bioportal.bioontology.org/ontologies/OGI?p=classes&conceptid=root
Ontology for Guiding Appropriate Antibiotic Prescribing http://www.sciencedirect.com/science/article/pii/S1532046411001675
Ontology for Information Science (OntoforInforScience) https://www.researchgate.net/publication/299534658_OntoforInfoScience_a_detailed_methodology_for_construction_of_ontologies_and_its_application_in_the_blood_domain
Ontology for Laparoscopic Surgeries (LapOntoSPM) http://link.springer.com/article/10.1007/s11548-015-1222-1
Ontology for MIcroRNA Target Prediction (OMIT) http://obofoundry.org/ontology/omit.html
Ontology for Newborn Screening and Translational Research (ONSTR) http://code.google.com/p/onstr
Ontology for Next Generation Sequencing Experiments (NGS Ontology) https://github.com/lindenb/ngs-ontology
Ontology for Nutritional Epidemiology (ONE) https://obofoundry.org/ontology/one.html
Ontology for Nutritional Studies (ONS) https://genesandnutrition.biomedcentral.com/articles/10.1186/s12263-018-0601-y
Ontology for Pain and Related Disability, Mental Health and Quality of Life (OPMQoL) http://www.referent-tracking.com/RTU/?page=projects.phtml#opmqol
Ontology for Parasite LifeCycle (OPL) http://obofoundry.org/ontology/opl.html
Ontology for Periodontitis (PERIO) http://www.jbiomedsem.com/content/6/1/30
Ontology for Stem Cell Investigations (OSCI) https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-019-2723-7
Ontology for Thoracentesis https://www.sciencedirect.com/science/article/pii/S0933365717301525
Ontology of Arthropod Circulatory Systems (OArCS) http://obofoundry.org/ontology/oarcs.html
Ontology of Biological and Clinical Statistics (OBCS) http://obofoundry.org/ontology/obcs.html
Ontology of Cancer Related Socialecological Variables (OCRSEV) http://ceur-ws.org/Vol-2137/ws_ONCONTO_paper_3.pdf
Ontology of Card Sleights https://arxiv.org/abs/1903.08523
Ontology of Card Sleights https://arxiv.org/abs/1903.08523
Ontology of Cardiovascular Drug Adverse Events (OCVDAE) https://www.nature.com/articles/s41598-017-12580-4
Ontology of Chinese Medicine for Rheumatism (OCMR) https://bioportal.bioontology.org/ontologies/OCMR
Ontology of Clinical Research (OCRe) http://code.google.com/p/ontology-of-clinical-research/source/browse/trunk/Archive/OCRe-with-BFO.owl
Ontology of Commercial Exchange (OCE) https://philarchive.org/archive/MERCCC
Ontology of Data Mining (OntoDM) http://www.ontodm.com/
Ontology of Datatypes (OntoDT) http://www.ontodt.com/
Ontology of Electronics (OOE) https://github.com/ontology-of-electronics
Ontology of Experimental Variables and Values (OOEVV) https://bioportal.bioontology.org/ontologies/OOEVV
Ontology of Genes and Genomes (OGG) http://obofoundry.org/ontology/ogg.html
Ontology of Genetic Disease Investigations (OGDI) https://bioportal.bioontology.org/ontologies/OGDI
Ontology of Genetic Susceptibility Factor (OGSF) http://obofoundry.org/ontology/ogsf.html
Ontology of Hemotherapy (HEMONTO) https://1library.net/document/q5946wgz-hemocomponents-hemoderivatives-ontology-hemonto-ontology-blood-components.html
Ontology of Medical Microbiology (OntoMic) http://rali.iro.umontreal.ca/rali/sites/default/files/publis/Levreault-MSc.pdf
Ontology of Medically Related Social Entities (OMRSE) http://obofoundry.org/ontology/omrse.html
Ontology of Microbial Phenotypes (OMP) http://obofoundry.org/ontology/omp.html
Ontology of Organizational Structures ofTrauma systems and Trauma centers (OOSTT) http://ceur-ws.org/Vol-1747/IT504_ICBO2016.pdf
Ontology of Social Participation (OPS) http://arxiv.org/pdf/1501.02662.pdf
Ontology of Systems Engineering https://www.sciencedirect.com/science/article/pii/S1877050919307380
Ontology of Vaccine Adverse Events (OVAE) http://obofoundry.org/ontology/ovae.html
Ontology, Logic and Technology Unit http://org.buffalo.edu/rarp/OLT%20Unit.html
Ontology-Based Data Access (OBDA) http://www.sciencedirect.com.gate.lib.buffalo.edu/science/article/pii/S1570826815000165
Ontology-Based Operational Emergency Response (POLARISC) https://onlinelibrary.wiley.com/doi/pdf/10.1002/9781119564034.ch52
Ontology-Based eXtensible Data Model (OBX) http://www.ncbi.nlm.nih.gov/pubmed/20460173
Ontology-Driven Information System (ODIS)/Ontology-Driven Scenario Generator (ODSG) http://www.sciencedirect.com/science/article/pii/S0952197615000913
Open Access Journals Integrated service System Project (GoOA) http://bioportal.bioontology.org/projects/PDOLAS
Open Model-Based Engineering Environment (OpenMBEE) https://link.springer.com/chapter/10.1007/978-3-030-82083-1_56
Open PHACTS http://www.openphacts.org/
Operational Environment Ontology (OEO) https://jsou.libguides.com/ld.php?content_id=37534351
Oral Health and Disease Ontology (OHD) http://obofoundry.org/ontology/ohd.html
Organization Ontology Based on ROR https://figshare.com/articles/presentation/An_Organization_Ontology_based_on_ROR/14839359
PGxO Pharmacogenomics Ontology https://www.biorxiv.org/content/biorxiv/early/2018/08/13/390971.full.pdf
POLARISC Emergency Response System Ontology http://idl.iscram.org/files/elmhadhbilinda/2018/1598_ElmhadhbiLinda_etal2018.pdf
PRISM: A Platform for Imaging inPrecision Medicine https://ascopubs.org/doi/pdfdirect/10.1200/CCI.20.00001
PROSPECT-IDR: Personalised Prediction of Infectious Disease Risk http://www.tara.tcd.ie/bitstream/handle/2262/86059/Final%20Version.pdf?sequence=1
Parasite Experiment Ontology (PEO) http://bioportal.bioontology.org/ontologies/1335
Part-Focused Manufacturing Process Ontology (PMPO) https://www.tandfonline.com/doi/abs/10.1080/0951192X.2017.1357837
Patient Safetry Categorial Structure (PS-CAST) http://person.hst.aau.dk/ska/MIE2015/Papers/SHTI210-0160.pdf
Petrochemical Ontology http://books.google.com/books?id=XYOBAusxPCcC&pg=PA27&lpg=PA27&dq=bfo+ontology&source=bl&ots=4nFYXvfaMy&sig=xq4BZAmY8DH0J5DMj3DE_xB4Fes&hl=en&ei=ZFpjStvADMaltgem27SyAg&sa=X&oi=book_result&ct=result&resnum=2
Phenotypic Quality Ontology (PaTO) http://obofoundry.org/ontology/pato.html
Physics-Based Simulation Ontology (PSO-Physics and PSO-Sim) https://www.tandfonline.com/doi/abs/10.1080/09544828.2019.1644301?journalCode=cjen20
Plant Experimental Assay Ontology (PEAO) http://bioportal.bioontology.org/ontologies/PEAO
Plant Ontology (PO) http://obofoundry.org/ontology/po.html
Plastic Rock Deformation (PRD) ontology https://www-sciencedirect-com.gate.lib.buffalo.edu/science/article/pii/S0098300416308482
Pneumonia Ontology https://www.researchgate.net/profile/Sabrina_Azzi/publication/328171801_Design_of_a_Pneumonia_Ontology_for_Diagnosis_Decision_Support_System/links/5bbcb970299bf1049b785032/Design-of-a-Pneumonia-Ontology-for-Diagnosis-Decision-Support-System.pdf
Ponte Ontology Platform (PONTE) https://www.sciencedirect.com/science/article/pii/S1569190X18301114
Population Health Record (PopHR) http://onlinelibrary.wiley.com/doi/10.1111/nyas.13271/full
Population and Community Ontology (PCO) http://obofoundry.org/ontology/pco.html
Porifera Ontology (PORO) http://obofoundry.org/ontology/poro.html
Praxis http://www.infor-med.com/downloads/articles_downloads/Praxis_EMR_SUNY_Interoperability_Project.pdf
Pre-Eclampsia Ontology (PEO) http://journals.plos.org/plosone/article%3Fid%3D10.1371/journal.pone.0162828
PreOptique Platform for Integrated Pre-surgery Reports https://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-019-0197-1
Precision Medicine Ontology (PMO) http://www.aimspress.com/fileOther/PDF/MBE/mbe-17-04-227.pdf
Prescription of Drugs Ontology (PRDO) https://pdfs.semanticscholar.org/7100/59ad86c5c2ef7a5b1430d30a8950a88aa319.pdf
Process and Observation Ontology (PO2) https://www.sciencedirect.com/science/article/abs/pii/S0958694619300032
Product Life Cycle Ontology for Additive Manufacturing https://www.sciencedirect.com/science/article/pii/S0166361518301647
Product Service System (PSS) Ontology https://www.diversity-project.eu/wp-content/uploads/2017/07/Ontology-for-Colaborative-Development-of-Product-Service-Systems-Based-on-Basic-Formal-Ontology.pdf
Proper Name Ontology (PNO) https://code.google.com/p/proper-name-ontology
Protein Ontology (PRO) http://obofoundry.org/ontology/pr.html
Protein-Ligand Interaction Ontology (PLIO) http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3106195
Provenir ontology for provenance modeling http://cci.case.edu/cci/images/a/aa/Janus.pdf
Public Safety and Emergency Management (PS/EM) Communications Ontology https://www.ida.org/-/media/feature/publications/p/pu/public-safety-and-emergency-management-communications-ontology/d-8583.ashx
QROWD urban traffic and mobility ontology http://qrowd-project.trackglobe.es/wp-content/uploads/2019/11/D4.3-Linked-Data-Generation.docx.pdf
Qualitative Spatiotemporal Reasoning Unit http://org.buffalo.edu/rarp/QSRUnit%20Page.html
Quality of Service (QoS) Ontology http://www.waset.org/publications/10000168
REMINE http://www.ramit.be/index.cfm?objectid=D06D28B6-1143-DEB7-74B2690FF1EC5110
RFID System Configuration Ontology (RFID SCO) https://doi.org/10.1017/S0269888921000096
RNA Ontology (RnaO) http://obofoundry.org/ontology/rnao.html
ROMAIN industrial maintenance ontology https://www.researchgate.net/publication/332390146_ROMAIN_Towards_a_BFO_compliant_reference_ontology_for_industrial_maintenance
Referent Tracking Unit http://org.buffalo.edu/RTU/index.html
Relations Ontology (RO) http://www.obofoundry.org/ontology/ro.html
Reliability Assessment for Assembly Stations (RAAS) Ontology https://infoscience.epfl.ch/record/265908/files/
Rescue Ontology (ResOnt) https://www.researchgate.net/profile/Samer-Chehade-2/publication/353571839
Rock Plastic Deformation (RPD) ontology http://www.sciencedirect.com/science/article/pii/S0098300416308482
Role Ontology (ROLEO) https://bioportal.bioontology.org/ontologies/ROLEO
SAIC www.saic.com/
SMART Protocols http://vocab.linkeddata.es/SMARTProtocols
SMART Protocols http://www.swat4ls.org/wp-content/uploads/2015/10/SWAT4LS_2015_paper_15.pdf
SNOMED CT (SCT) Standard Ontology https://bmcmedinformdecismak.biomedcentral.com/articles/10.1186/s12911-018-0651-5
STATO-LMM Linear Mixed Model Ontology https://www.nature.com/articles/s41597-020-0409-7
Saitama University - Faculty of Liberal Arts http://www.saitama-u.ac.jp/
Saliva Ontology (SALO) http://code.google.com/p/bodily/source/browse/trunk/src/ontology/salo.owl
Schistosomiasis Process Ontology (IDOSCHISTO) http://ceur-ws.org/Vol-1747/IP01_ICBO2016.pdf
Science Applications International Corporation (SAIC) https://www.saic.com
Science Commons http://www.sciencecommons.org/
Scientific Evidence and Provenance Information Ontology (SEPIO) http://ceur-ws.org/Vol-1747/IT605_ICBO2016.pdf
Securboration http://www.securboration.com/
Semantic Electronic Health Record (SEHR) Model http://www.linked2safety-project.eu/node/44
Semantic LAminated Composites Knowledge management System (SLACKS) http://dl.acm.org/citation.cfm?id=2580238
Semantic Reference Model for Individualization of Information Processes https://www.mdpi.com/2079-9292/10/20/2523
Semantic Systems Engineering Ontology (SESO) https://indico.esa.int/event/386/contributions/6243/attachments/4281/6391/1435%20-%20using%20semantic%20systems%20engineering%20techniques%20to%20verify%20the%20large%20aperture%20space%20telescope%20mission%20%E2%80%93%20current%20status.pdf
Semanticscience Integrated Ontology (SIO) http://code.google.com/p/semanticscience/wiki/SIO
Senselab Ontology http://www.ncbi.nlm.nih.gov/pubmed/20006477
Sentinel: Platform for Semantic Enrichment of Social Media Streams http://ieeexplore.ieee.org/document/8232468/
Sequence Ontology (SO) http://obofoundry.org/ontology/so.html
Shop-Floor Digital Twin (DT) ontology http://ceur-ws.org/Vol-2615/paper5.pdf
Situated and Interactive Multimodal Conversations https://arxiv.org/pdf/2006.01460.pdf
Situation Awareness Ontology (SAO) http://link.springer.com/article/10.1007/s10489-016-0834-7
Skeletome http://itee.uq.edu.au/~eresearch/projects/skeletome
Sketch Map Ontology https://www.tandfonline.com/doi/abs/10.1080/13658816.2017.1309043?journalCode=tgis20
Skin Physiology Ontology (SPO) https://bioportal.bioontology.org/ontologies/SPO
Sleep Domain Ontology (SDO) http://bimib.disco.unimib.it/images/7/7c/SSFW09_Arabandi_SleepOntology.pdf
Smart Ultrasound in Obstetrics and Gynecology (SUOG) Ontology https://icbo2021.inf.unibz.it/wp-content/uploads/2021/09/169_S1_ElGhosh_paper_8.pdf
Social Psychology Ontology (SPO) https://ubir.buffalo.edu/xmlui/handle/10477/79440
Software Ontology (SWO) http://jbiomedsem.biomedcentral.com/articles/10.1186/2041-1480-5-25
Software, Disabilities and Competences Ontology (SODIC) http://dspace.ucuenca.edu.ec/bitstream/123456789/28548/1/Trabajo%20de%20Titulaci%C3%B3n.pdf
Space Domain Ontologies (SDO) https://philpapers.org/rec/COXTSD-2
Space Object Ontology (SOO) https://ieeexplore.ieee.org/document/7527882
Spatial Graph Adapter (SGA) Ontology Design Pattern http://www.semantic-web-journal.net/system/files/swj1582.pdf
Spatial Relation Ontology http://ceur-ws.org/Vol-2728/paper3.pdf
Spatiotemporal Ontology for the Administrative Units of Switzerland (SONADUS) http://www.geo.uzh.ch/dam/jcr:6c3c9ef3-6bcd-4300-86e4-9de07d3f6f37/msc_felix_gantner_2011.pdf
Special Nuclear Materials Detection Ontology (SNM-DO) http://ceur-ws.org/Vol-808/STIDS2011_CR_P2_WardEtAl.pdf
Statistics Ontology (STATO) http://obofoundry.org/ontology/stato.html
Subcellular Anatomy Ontology (SAO) http://obofoundry.org/ontology/sao.html
Suggested Ontology for Pharmacogenomics (SO-Pharm) http://obofoundry.org/ontology/sopharm.html
Supply Chain Traceability Ontology https://asmedigitalcollection.asme.org/computingengineering/article-abstract/22/5/051002/1139465/Enabling-Traceability-in-Agri-Food-Supply-Chains
Surface Water Ontology (SWO) https://www.usgs.gov/media/files/surface-water-ontology
Survey Ontology https://www.scitepress.org/papers/2017/65827/65827.pdf
TRADOC Operational Environment Center www.tradoc.army.mil/g2/oetsc/videoTBOC_flv.aspx
Taxonomy for Rehabilitation of Knee Conditions (TRAK) http://users.cs.cf.ac.uk/I.Spasic/trak
The Common Rule Ontology (CRO) https://github.com/CRO-ontology/CRO
The Trope Ontology https://www.mdpi.com/2409-9287/4/3/40
Thermo Fisher Scientific https://www.thermofisher.com/us/en/home.html
Time Event Ontology (TEO) https://bioportal.bioontology.org/ontologies/TEO
Toxic Process Ontology (TXPO) http://www.obofoundry.org/ontology/txpo.html
Trade-Space Analysis Tool for Constellations (TAT-C) ontology https://arc.aiaa.org/doi/abs/10.2514/6.2019-1032
Traditional Chinese Drugs Ontology (TCDO) https://www.hindawi.com/journals/ecam/2021/6637810/
Translational Medicine Ontology (TMO) http://esw.w3.org/topic/HCLSIG/PharmaOntology
Transportation System Ontology http://www.ontobee.org/ontology/TSO
Tumour-Node-Metastasis Ontology (TNM-O) https://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-016-0106-9
U.S. Geological Survey (USGS) - Center of Excellence for Geospatial Information Science (CEGIS) http://cegis.usgs.gov/ontology.html
UMass Engineering Core Ontologies https://www.mdpi.com/2079-8954/6/4/46/pdf
United Nations SDG (Sustainable Development Goals) Ontology Framework https://iswc2017.ai.wu.ac.at/wp-content/uploads/papers/MainProceedings/179.pdf
United Nations System Document Ontology (ONTO-UNDO) https://unsceb-hlcm.github.io/onto-undo/
Universal Core Semantic Layer http://sunsite.informatik.rwth-aachen.de/Publications/CEUR-WS/Vol-555/paper5.pdf
University of Arkansas, Biomedical Informatics, Medical Center, Little Rock http://www.uams.edu/cctr/infocore/infocore.asp
University of Augsburg - Computer Science - Software Methodologies for Distributed Systems http://www.informatik.uni-augsburg.de/en/chairs/swt/ds
University of South Alabama - School of Computing - South Biomedical Informatics (SBI) Research Group http://biomedical.cis.usouthal.edu/
University of Texas Southwestern Medical Center http://www.utsouthwestern.edu/
University of Washington - Structural Informatics Group (SIG) http://sig.biostr.washington.edu/
VIVO http://vivoweb.org/
VIVO Ontology https://openreview.net/forum?id=SkgyVa-coV
Vaccination Informed Consent Ontology (VICO) http://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-016-0062-4
Vaccine Ontology (VO) http://obofoundry.org/ontology/vo.html
Value Stream Mapping (VSM) Ontology https://era.library.ualberta.ca/items/5ad997be-0f3d-4456-8108-b3c69d851a98/view/060e801a-92a5-44ac-ba8a-0a00ab22765e/Abdelghani_Mohammad_202101_PhD.pdf
Virus Pathogen Resource (ViPR) http://www.viprbrc.org/brc/home.do?decorator=vipr
Visualized Emotion Ontology (VEO) https://bmcmedinformdecismak.biomedcentral.com/articles/10.1186/s12911-018-0634-6
Vital Sign Ontology (VSO) http://ontology.buffalo.edu/smith/articles/Vital_Sign_Ontology.pdf
Volcanism Ontology (VO) https://scholarworks.gsu.edu/cgi/viewcontent.cgi?article=1124&context=geosciences_theses
Volcanism Ontology (VO) https://scholarworks.gsu.edu/cgi/viewcontent.cgi?article=1124&context=geosciences_theses
Volley: AI-powered learning hub http://volley.com/
Xenopus Anatomy Ontology (XAO) http://obofoundry.org/ontology/xao.html
Xenopus Phenotype Ontology (XPO) https://www.biorxiv.org/content/biorxiv/early/2021/11/13/2021.11.12.467727.full.pdf
ZEMELA Intelligent Agriculture Platform https://ieeexplore.ieee.org/abstract/document/9627248
eNanoMapper http://www.enanomapper.net/
eXtended Formal Ontology (XFO) https://www.researchgate.net/profile/Robert_Allen5/publication/325141757_XFO_Toward_Programming_Rich_Semantic_Models/links/5afa473d458515c00b6bd24f/XFO-Toward-Programming-Rich-Semantic-Models.pdf?origin=publication_detail
eagle-i Research Resource Ontology http://obofoundry.org/ontology/ero.html
libryo https://libryo.com/
miRNAO http://iwbbio.ugr.es/2014/papers/IWBBIO_2014_paper_103.pdf
openEHR http://www.openehr.org/wiki/display/ontol/Ontologies+Home
uc_Eating https://github.com/IC-FOODS/uc_Eating
uc_FoodDrugInteractionOntology https://github.com/IC-FOODS/uc_FoodDrugInteractionOntology
uc_Milk https://github.com/IC-FOODS/uc_Milk
uc_Processing https://github.com/IC-FOODS/uc_Processing
uc_Sense https://github.com/IC-FOODS/uc_Sense
yOWL http://www2007.org/workshops/paper_130.pdf


Instituions/Groups/Projects


  1. Air Force Research Laboratory, Rome, New York
  2. Allotrope Foundation: Rethinking Scientific Data
  3. AstraZeneca
    • Clinical Information Science (see also here )
  4. Autodesk
  5. Bentley Software, Inc.
  6. Berkeley Bioinformatics Open-Source Projects (BBOP)
  7. Biomedical Knowledge Engineering Lab at Seoul National University (SNU BiKE)
  8. Brain Operation Database (BODB)
  9. Center for e-Design
  10. CTSAconnect
  11. CUBRC
  12. Darwin Core (DwC) (see also here )
  13. DOQS : Data-Oriented Quality Solutions
  14. DSpace at NTNUA
  15. Dumontier Lab
  16. eagle-i Research Resource Ontology
  17. Ecole polytechnique federale de Lausanne (EPFL)
  18. Elsevier Smart Content Strategy
  19. eNanoMapper
  20. EuPath Ontology
  21. Extensible Neuroimaging Archive Toolkit (XNAT)
  22. Good Ontology Design (GoodOD)
  23. HIGHFLEET
  24. Influenza Research Database (IRD)
  25. INRIA Lorraine Research Unit
  26. Institute for Defense Analysis
  27. Japan Advanced Institute of Science and Technology (JAIST)
  28. Johns Hopkins University Applied Physics Lab
  29. Kobe University, Graduate School of Medicine, Department of Sociomedical Informatics
  30. L3 Data Tactics Corporation (see also here )
  31. Language and Computing
    Bought by Nuance
  32. libryo
  33. Medical University Graz - Institute of Medical Informatics, Statistics and Documentation
  34. National Center for Multi-Source Information Fusion
  35. OntoCAT
  36. OntoCOG
  37. Ontology Research Group at the New York State Center of Excellence in Bioinformatics & Life Sciences
  38. Open Access Journals Integrated service System Project (GoOA)
  39. Open PHACTS
  40. openEHR
  41. OSTHUS
  42. Praxis : EMR research on interoperability and query of clinical records
  43. REMINE
  44. SAIC
  45. Saitama University - Faculty of Liberal Arts (see also here )
  46. Science Applications International Corporation (SAIC)
  47. Science Commons
  48. Securboration
  49. Skeletome
  50. SMART Protocols
  51. Thermo Fisher Scientific
  52. TRADOC Operational Environment Center
  53. U.S. Geological Survey (USGS) - Center of Excellence for Geospatial Information Science (CEGIS)
  54. University of Arkansas, Biomedical Informatics, Medical Center, Little Rock
  55. University of Augsburg - Computer Science - Software Methodologies for Distributed Systems
  56. University of South Alabama - School of Computing - South Biomedical Informatics (SBI) Research Group (see also here )
  57. University of Texas Southwestern Medical Center (see also here )
  58. University of Washington - Structural Informatics Group (SIG)
  59. Virus Pathogen Resource (ViPR)
  60. VIVO : An interdisciplinary national network enabling collaboration and discovery between scientists across all disciplines (see also here )
  61. Volley: AI-powered learning hub